Insertion junction: CLIP2.035932_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.035932
Chromosome:chromosome 7
Location:4920927
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346672 (1 of 3) IPR000104//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, cysteine-containing subtype CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCATTCCGCTGCTGCCATCAGATGCTGCCGCCTCCATCTCCTCCTCCTCG
Internal bar code:TCGGATTACATCTGCTTAATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2344
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGGTGAGAGTTGGGTAA
Suggested primer 2:CGGCTTGCACGAACTTCTTC