Insertion junction: CLIP2.035939_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.035939
Chromosome:chromosome 11
Location:858813
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467648 RBL3 Rhomboid-like protease; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATTTCCACCTCCTGCCGGTGGCTTTGGCATCTTGGTGTGCCCCCGGG
Internal bar code:GTGCGTCTCAGGGGCGGCCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:713
LEAP-Seq percent confirming:56.5217
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGCATACGTTACGGAGCG
Suggested primer 2:GCGAGCGACTGTATACGTGA