Insertion junction: CLIP2.035944_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.035944
Chromosome:chromosome 14
Location:3413839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630050 (1 of 6) PTHR13339//PTHR13339:SF0 - COP9 SIGNALOSOME COMPLEX SUBUNIT 8 // COP9 SIGNALOSOME COMPLEX SUBUNIT 8 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGTGACGACCAGGGCGTGTGCCCGGTCTGCCAGACCAGGCGCAAGAAGT
Internal bar code:TTTCCGTCCAATTTTGACAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:2306
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCAACGGCATGCATACCT
Suggested primer 2:AACTGCTGCTGCCACCTTAT