Insertion junction: CLIP2.035947_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035947
Chromosome:chromosome 4
Location:2337163
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220900 GT90-4,GT90F4 (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90); GT90 family protein 4 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGCTGCGAAGGGTTGCGTTGGCTGGCTGCTTGATGTATGTGTCAAGG
Internal bar code:ATATCGCTTCTGAGTCAGTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1540
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CACATCTCGCAATCAAGCCG
Suggested primer 2:GCATACCGTATACGCACCCA