Insertion junction: CLIP2.035960_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035960
Chromosome:chromosome 9
Location:3720727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397327 (1 of 1) PTHR11139:SF68 - DNA-DEPENDENT PROTEIN KINASE CATALYTIC SUBUNIT intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCATCATGCAGCTCACCCAACAGTGCCTTGGCTTAAAGAATCCATTG
Internal bar code:ACTACAAAGAATGCTTCATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:734
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTCATCCACCTCCATCGA
Suggested primer 2:TTGGAGTGTCGAGGGATTGC