Insertion junction: CLIP2.035970_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035970
Chromosome:chromosome 1
Location:4097967
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g027200 UBC12 E2 Ubiquitin conjugating enzyme; (1 of 1) K10576 - ubiquitin-conjugating enzyme E2 H (UBE2H, UBC8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGACTTCATAACGCGTGCTGGGCGCCGTTTGGGTCGGCGCGGCTCGA
Internal bar code:GTGTAAGTTGAGAATCGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3924
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:153
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:153

Suggested primers for confirmation by PCR

Suggested primer 1:CACCCTTGACTTTGTTGGCG
Suggested primer 2:CGCGGGTAGCTGTACAGTAG