Insertion junction: CLIP2.035980_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.035980
Chromosome:chromosome 8
Location:3854502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g381702 ALDH5,ALDH5G1 (1 of 1) 1.2.1.16 - Succinate-semialdehyde dehydrogenase (NAD(P)(+)); Aldehyde dehydrogenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACATACCCCTCTCCCGCCCACCACCTGCTGGGTGGCTCCAGCACGT
Internal bar code:TTGGGGCGAGTGATTGCCGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:598
LEAP-Seq percent confirming:71.4286
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCGTGAAAACGGGGAGAT
Suggested primer 2:CTTTGCGAGTGATCTGCGTG