Insertion junction: CLIP2.035990_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035990
Chromosome:chromosome 9
Location:4135301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399402 (1 of 2) PTHR24305//PTHR24305:SF65 - FAMILY NOT NAMED // CYTOCHROME P450 12A4, MITOCHONDRIAL-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTCTGCATGGGGGTTGCATTCATGATTAGCTATGAAAATGGCAGACGG
Internal bar code:ATTAGCGGGAATTCTCTCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:269
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGGTGGTGATACCGGTAG
Suggested primer 2:GCGGCTCCGATCAAATTTCC