Insertion junction: CLIP2.035993_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.035993
Chromosome:chromosome 8
Location:1241063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363450 (1 of 2) IPR003034//IPR009061 - SAP domain // Putative DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCTCGGGAGTTGTTGAAGCTCGCTGTCGCTTTTGCCGCGCCATAGCT
Internal bar code:GCAGCGGGAGTTTGTGGAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3172
LEAP-Seq percent confirming:96.9512
LEAP-Seq n confirming:159
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:164

Suggested primers for confirmation by PCR

Suggested primer 1:CTTAATGTCCGGCTGCATGC
Suggested primer 2:CTTCCGCTCCTTCTTGGGTT