Insertion junction: CLIP2.035997_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.035997
Chromosome:chromosome 7
Location:671538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317250 CHI5 (1 of 2) K01183 - chitinase (E3.2.1.14); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGAAGAGCGCGCTCTAGCCAGCTTTTTGTCGGGCCTGCTGCCTGCCT
Internal bar code:GTTTGACCTCCTTCTAACCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:10.3448
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:26
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACAGTCCCGTACATCG
Suggested primer 2:GTGCACCACCTACATGAGCT