Insertion junction: CLIP2.036006_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036006
Chromosome:chromosome 15
Location:1215093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g801719 NCL59 Nuclear Control of chloroplast-Like 59; (1 of 5) IPR013584//IPR016024 - RAP domain // Armadillo-type fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGGCTGCAGCCGGCCGGCTTGCGGATGCGCGGCACGAGCGGAAGGAG
Internal bar code:TGTGCGCAGTAGATGTTTGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2482
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCTTCAACTTGTGTGGC
Suggested primer 2:TGGTTTAAAGCCGGCAAAGC