Insertion junction: CLIP2.036009_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036009
Chromosome:chromosome 6
Location:961476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256450 PF6-IP2,FAP119,C1a-34 Flagellar central-pair associated Protein 119; (1 of 2) PF14769 - Flagellar C1a complex subunit C1a-32 (CLAMP) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAACCGGTCCCATTGCCGCCTGGAACTGTAATCACCTGCGCGTGCGCC
Internal bar code:GTGGTATCGCGTCTTGTTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCAGGCACAGGAATGGG
Suggested primer 2:GCAGAACTAGCGCGACATTG