Insertion junction: CLIP2.036012_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036012
Chromosome:chromosome 6
Location:5564066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287150 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGCAATGCGGGGGTGGCGGAGGAGGAGCAGGCGAGGGAAGGGAGAGG
Internal bar code:ATAATTGACAAGGATGGATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2672
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCAAACTCCAAGCTCC
Suggested primer 2:ACTTGCGGCATTGTTTCCAC