Insertion junction: CLIP2.036034_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036034
Chromosome:chromosome 3
Location:8614246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCCAAGACTCCAGCTGCTCAGGCGTGTACAGGCCGGGGGTGTTCAGG
Internal bar code:CTACCGTCACAAGCTGTAACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3754
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:88
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTCGTCAGTGAAACGTC
Suggested primer 2:CCTTGACGATGCGCTTGATG