Insertion junction: CLIP2.036037_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036037
Chromosome:chromosome 13
Location:216427
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563500 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGAGTGTCAAGGGGAAGGGGTGCATGTCTGAGTAGGGCGCGAGGTGCG
Internal bar code:AACTGTCGCTGGATAGTCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:92.5926
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCACCAACCTGTCGTTTCAC
Suggested primer 2:GCGCACGTGTTTGTAAGTGT