Insertion junction: CLIP2.036037_4

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036037
Chromosome:chromosome 13
Location:216432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563500 (1 of 8) IPR011047//IPR018391 - Quinonprotein alcohol dehydrogenase-like superfamily // Pyrrolo-quinoline quinone beta-propeller repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAACACACTTGTACACCGTGTGCACGCACATACAGGTGGCAGATCAG
Internal bar code:AGCTTTGAGCTCAAGAGAATGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4111
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACGTGTTTGTAAGTGT
Suggested primer 2:GCACCAACCTGTCGTTTCAC