Insertion junction: CLIP2.036040_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036040
Chromosome:chromosome 3
Location:7991429
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g201900 RSP1 (1 of 1) PTHR23084//PTHR23084:SF172 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED // SUBFAMILY NOT NAMED; Radial spoke protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTAAAGCCTCTCACCTCCTTCTCCTCTTCTTTCTCCTCCTCCTCGTC
Internal bar code:GTTTTTCATTGAGAATCCGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2415
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATCGTGGACTTGAGGAC
Suggested primer 2:GTAGGAGTGAGGGGGATGGT