Insertion junction: CLIP2.036042_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036042
Chromosome:chromosome 11
Location:2643607
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095079 (1 of 2) IPR000104//IPR011705 - Antifreeze protein, type I // BTB/Kelch-associated CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGAGCCCGAGTGTGCTGGTAAGTTCAACGGATAAGTAAAAATGAGAACG
Internal bar code:TTTCTGTATGAGGTAGGCGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3227
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTACATGTCTTTGCAGCG
Suggested primer 2:GGAAATGCAAAGCACCAGGG