Insertion junction: CLIP2.036050_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036050
Chromosome:chromosome 5
Location:1522933
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234660 (1 of 4) IPR011016//IPR013083 - Zinc finger, RING-CH-type // Zinc finger, RING/FYVE/PHD-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCATTGAACCTGAAAAGCGCGCTAACGACGCCGCCCTGCCCGGCGCG
Internal bar code:TATGGTAATATTTACCAAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:3347
LEAP-Seq percent confirming:98.0392
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCAATGCCAAATCCCGC
Suggested primer 2:AAATGGCGGGAATCTGAGCA