Insertion junction: CLIP2.036051_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036051
Chromosome:chromosome 7
Location:4386821
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g340900 (1 of 1) PTHR31223//PTHR31223:SF11 - FAMILY NOT NAMED // LOG FAMILY PROTEIN YJL055W CDS
Cre07.g340950 AXL4 (1 of 6) PTHR10994//PTHR10994:SF61 - RETICULON // RETICULON-LIKE PROTEIN; Arabinose chain extension enzyme like protein 4 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAGTTGTATTAGTCGCGGGGCTCAAGGCTGGCGAGTGGCGGGAGGCAC
Internal bar code:TTCGTTGGGTGGAGTCATGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2677
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGTCAGGGCAGATTGG
Suggested primer 2:TTTTGCTGTTGCGTAGGTGC