Insertion junction: CLIP2.036052_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036052
Chromosome:chromosome 4
Location:1181728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g215500 (1 of 1) PF09735 - Membrane-associated apoptosis protein (Nckap1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACACGATGAAGATTGTGGCATGCATGAGAGCTTGTAAGAGCTGGGAT
Internal bar code:GCCGTACCTTATGGCAGTCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2746
LEAP-Seq percent confirming:93.5484
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GAACGAGTTGACTGCATGGC
Suggested primer 2:GTGCTTTCCTTGCAGGGTTG