Insertion junction: CLIP2.036057_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036057
Chromosome:chromosome 3
Location:5683258
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186700 (1 of 7) IPR001606 - ARID DNA-binding domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGACAGCGCAGGCCGACACATACAAATCAGGGATCCCCGGTGGGACAGC
Internal bar code:TATGAGGGTTGTCATGGGAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4315
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTCGAAAGGAGTCTTGGG
Suggested primer 2:CTCCAGCTGCAGCAGGTATT