Insertion junction: CLIP2.036059_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036059
Chromosome:chromosome 1
Location:1790130
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010000 MAPK8 Mitogen-Activated Protein Kinase; (1 of 1) K14512 - mitogen-activated protein kinase 6 (MPK6) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTCTGTGCAGGATGTTGGCGCTGTGGATGTATTTGAGCCCTCTCAACA
Internal bar code:TTGAACTCACATACGGTCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:451
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAACGACCACAGCCAGTACT
Suggested primer 2:CCACCTTGGTGATGAGGGAC