Insertion junction: CLIP2.036064_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036064
Chromosome:chromosome 8
Location:4054842
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGTACCCGGGCACGAGGCCAACGCTGCGCTTGGCGCGGCGCGACACAG
Internal bar code:ATCTAGGGGTTTCCAGCAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1856
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGTTATCGGAGCATCTG
Suggested primer 2:CCTTGGGGATGGTCTTCACC