Insertion junction: CLIP2.036064_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036064
Chromosome:chromosome 8
Location:4054843
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382800 CDPK13 (1 of 1) PF00036//PF07714//PF13499 - EF hand (EF-hand_1) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCCGGGGCTGGCCTAGAGGGTACTGGCAACCACCCATGTGGGTCAGG
Internal bar code:ATCTAGGGGTTTCCAGCAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:882
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGGGGATGGTCTTCACC
Suggested primer 2:AGCGGTTATCGGAGCATCTG