Insertion junction: CLIP2.036068_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036068
Chromosome:chromosome 12
Location:9088350
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544401 (1 of 1) PTHR20934:SF0 - TRANSCRIPTION ELONGATION FACTOR 1 HOMOLOG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCGCCCACCCGACCCCACACTGCCACCGTCCAGACGCATCCGCCGC
Internal bar code:CCAGTGAATCGGAACACGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1619
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTTCCAGAACTGTCCTC
Suggested primer 2:TGATTTCAGGTCAGGGTGGC