Insertion junction: CLIP2.036070_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036070
Chromosome:chromosome 1
Location:1843097
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g010250 PPP2 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCAGTTCCGCCCGACCAGCCTCCACTTCCCCTGCACTCACGCACAC
Internal bar code:TACTACAACTGTGACCTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAGTACGGCCAAAGTC
Suggested primer 2:TGACAGTTTGCCCTGTGTGT