Insertion junction: CLIP2.036084_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036084
Chromosome:chromosome 3
Location:5657786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186400 SCR1 (1 of 3) PF03803 - Scramblase (Scramblase); Putative phospholipid scramblase CDS
Cre03.g186450 LNM1 Lysine N-methylase; (1 of 5) PTHR13271//PTHR13271:SF28 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGATGATGCCCGGCAACCTGGAGGCGCTGGTGAGTTGCAAATGCCAA
Internal bar code:TTCATCGTATCAATGATCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3938
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGTACGGAGGTGCTACG
Suggested primer 2:CACGTTGGTTTGGCTTGAGG