Insertion junction: CLIP2.036086_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036086
Chromosome:chromosome 9
Location:5411856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408400 TPT12,TPT13 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC; Triose phosphate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCCATGATGCTGGACCGCCTGGTGTTCCCCGAGAATAGCGGCCGTGCC
Internal bar code:GTCATAAAATATGTATCACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1161
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTACTGCTGCTCCTTTCC
Suggested primer 2:ATTGACTGCAGCTGACGTCA