Insertion junction: CLIP2.036086_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036086
Chromosome:chromosome 9
Location:5411856
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g408400 TPT12,TPT13 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC; Triose phosphate transporter CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGTGGCAATCTCCACCTGTGCCTTGACCGGGATGGCGCTTGCGTGC
Internal bar code:GTTCACCCAGTGCAATAGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1033
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGACTGCAGCTGACGTCA
Suggested primer 2:TGCTACTGCTGCTCCTTTCC