Insertion junction: CLIP2.036107_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036107
Chromosome:chromosome 2
Location:6678833
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387134 (1 of 3) PF04379 - Protein of unknown function (DUF525) (DUF525) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCATGCACCGTACAAGTTAGCGTGCTCACCCACAACGGCATTGCCGG
Internal bar code:TAGCGTGAAGCGTACCGTATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2949
LEAP-Seq percent confirming:88.3333
LEAP-Seq n confirming:53
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTGGAGCAGCAGTACCTG
Suggested primer 2:ATCTGGTCGTGGCAGGAAAG