Insertion junction: CLIP2.036108_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036108
Chromosome:chromosome 9
Location:3939897
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g398252 (1 of 13) 1.1.1.300 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGGAGCGGTTGCGGATCGGAGGGTCAAGTGCGCGCGCTCCGAGGGG
Internal bar code:TAGTGTCTAGTCTTTTTGGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:684
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGTCGGGGGTCTTAACTC
Suggested primer 2:CTTCCCACACACCATCCCTC