Insertion junction: CLIP2.036113_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036113
Chromosome:chromosome 9
Location:6025828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412550 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGGCAGAAACCGATCCAAGGGGATCATCACCAGATAGGGACTGCCTA
Internal bar code:TTGAGGGTGTTGAGCGTAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4900
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGTTGCATTGCCATGTGT
Suggested primer 2:GGATGTATCTGTCAGCGGGG