Insertion junction: CLIP2.036113_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036113
Chromosome:chromosome 9
Location:6025830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412550 (1 of 3) IPR000104//IPR005069 - Antifreeze protein, type I // Nucleotide-diphospho-sugar transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGAATCCAGCTCGGCTGGTCACATTGTAACAATAAGTTCTTCATGTG
Internal bar code:TTGAGGGTGTTGAGCGTAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTATCTGTCAGCGGGG
Suggested primer 2:GTGGTTGCATTGCCATGTGT