Insertion junction: CLIP2.036114_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036114
Chromosome:chromosome 3
Location:7465213
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTAAGTATGACTACCTGGGTCACGACAGTCACGCGACGCTCGGTAAAA
Internal bar code:TATCTGTGATCTGGTTCATGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3344
LEAP-Seq percent confirming:97.7273
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAGCCACAGAAGAAT
Suggested primer 2:CCCACCACCAGTTGCAAATG