Insertion junction: CLIP2.036114_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036114
Chromosome:chromosome 3
Location:7465232
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g205700 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGCGACCATTCGGCCTGACCCCGCGATGCACCTGTATGCGTGTGTGT
Internal bar code:TTAACATCGGACGACTAAGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4954
LEAP-Seq percent confirming:97.0588
LEAP-Seq n confirming:99
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACCACCAGTTGCAAATG
Suggested primer 2:AGCAGCAGCCACAGAAGAAT