Insertion junction: CLIP2.036118_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036118
Chromosome:chromosome 11
Location:1758512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468050 VIPP2 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGGTCACGATGCGCGCAACCCGGGCAAACAGATTGGCAGACACGGCT
Internal bar code:GAATGGTTGCTCGACTAATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3178
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGACTTCCGGGGGAAAATGA
Suggested primer 2:GTCTTCCTGCATCTCCTCCG