Insertion junction: CLIP2.036122_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.036122
Chromosome:chromosome 6
Location:5598156
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287450 (1 of 18) K08824 - cyclin-dependent kinase-like [EC:2.7.11.22] (CDKL) CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATACATCTGAGAGCGCATGCGGGGGCCACAGCGGTCTTTGGCAGCCG
Internal bar code:AAATACCTTCGATTCAACTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1068
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCACACACACAAAGCTCGTG
Suggested primer 2:TTTGTGATGGCGAACCGAGA