Insertion junction: CLIP2.036125_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.036125
Chromosome:chromosome 3
Location:8053417
Confidence (%):80
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATACCGTACTATGAGACGGATGATTGCGCTCGGCAATGGCTGGCCCG
Internal bar code:TGGTCGCTCCAGTCTTACACCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1936
LEAP-Seq percent confirming:29.8246
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGTAGATGGCGTCGTGA
Suggested primer 2:GAGTGTGGAAGGTGCGTGTA