Insertion junction: CLIP2.036128_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036128
Chromosome:chromosome 3
Location:5112125
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180600 FPN3 (1 of 3) K01081 - 5'-nucleotidase (E3.1.3.5); Flagellar Associated 5'-nucleotidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACGCCGCTGGTCTGGGGGAAGCGGCCCTCCAGCTTGGGCCATTGAGA
Internal bar code:CGGGGTACGATGTTGGTTGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCCGCCATTACCATAGAT
Suggested primer 2:AAACATAGGCAGGGACAGGC