Insertion junction: CLIP2.036132_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036132
Chromosome:chromosome 12
Location:8629100
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g548200 (1 of 1) PTHR21004:SF0 - PEROXISOMAL LEADER PEPTIDE-PROCESSING PROTEASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGTTGCGGCCGCTGTTGGCGCTGGCACCACTGCTGCTGCCATTGCCG
Internal bar code:CCCATGCGCTCAACAGATAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTACCTGTGGGGAGAGG
Suggested primer 2:CGCAAACTACGGTATGTGCG