Insertion junction: CLIP2.036134_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.036134
Chromosome:chromosome 7
Location:4884644
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346418 (1 of 2) PTHR13271//PTHR13271:SF30 - UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGTCCCCAGTTATCCCCGAAGGGGGTTTCTGTTGTATCACTTGCCAA
Internal bar code:GGTTTCGGTTCCAAGGGAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:39.2857
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAACCCCATCCTCCTCCC
Suggested primer 2:CTTCTCCTCTTCGTCCTCGC