Insertion junction: CLIP2.036137_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.036137
Chromosome:chromosome 2
Location:5824844
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800243 CDS
lncRNA_TCONS_00041141 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCACTCGTCCGTATAGCCCATGCATACGCAAATACGTCTTTCTCACC
Internal bar code:CGCTTTCGAATTATCTTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2784
LEAP-Seq percent confirming:96.7213
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GATGACGGATGGCTGCCATA
Suggested primer 2:AGAGCCATAAGTGCACCCAC