Insertion junction: CLIP2.036138_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.036138
Chromosome:chromosome 12
Location:8413450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550250 (1 of 3) PF03638 - Tesmin/TSO1-like CXC domain, cysteine-rich domain (TCR) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAAGCGATGCAACTGCAAAAAGGCCCGGTGCCTCAAGCTTTACTGCG
Internal bar code:AAGATGTCAATATATAAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:696
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTATCCTGGAACCCCTCA
Suggested primer 2:AACAGCTTTACGACGGCTCA