Insertion junction: CLIP2.036140_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036140
Chromosome:chromosome 16
Location:7064862
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g674852 HAP2,GCS1 (1 of 1) PF10699 - Male gamete fusion factor (HAP2-GCS1); Generative cell specific-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGACGACAAGTACTGCAGCGGGTAGGAGGCCCACAGCGGCGACTTGG
Internal bar code:TGCAACGGGTTACGTGGTGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1608
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGACACCGAGACGTGAAA
Suggested primer 2:GCTTGCGGCCAATCAGTATG