Insertion junction: CLIP2.036144_4

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.036144
Chromosome:chromosome 13
Location:4874919
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g605200 MMP29 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGCGCCCTGCCCCTGCCCATCCCCACCACACCTACTCACGCCTACC
Internal bar code:GTTGGTTCAAAGTCGGCGTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGACCGCTACGAACCATA
Suggested primer 2:CACGCCTGTGTTTGGTTCAG