Insertion junction: CLIP2.036153_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036153
Chromosome:chromosome 17
Location:3677301
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725600 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGCGCTGCCCATGCTCGCCGCCGGGGGCGCCGCCGCCCGCTGGCGC
Internal bar code:TACCCTGATTTCAGGATCTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAAGTGAACGCGTTGCA
Suggested primer 2:GGTCCCACATATAGTCGCGG