Insertion junction: CLIP2.036154_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.036154
Chromosome:chromosome 3
Location:5154651
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181000 (1 of 6) 2.8.2.8 - [Heparan sulfate]-glucosamine N-sulfotransferase / PAPS:N-desulfoheparin sulfotransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGCCCGGACCCGCTTCGCCGAGCAGATGAGCGCGCTGGGCGAAGCT
Internal bar code:TGCACGGAGTCTGCTAGTAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:5231
LEAP-Seq percent confirming:76.4706
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAACGCCCCCGAAATATA
Suggested primer 2:ACATCAGTGCGGACGTTTCT