Insertion junction: CLIP2.036167_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036167
Chromosome:chromosome 3
Location:4287491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTTTTGGAACGGCAACCGAACCGAACACGACCAATGACGCTTCAAACA
Internal bar code:CTGTGTTCACGGGCGCGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1189
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AGACTGAAGTGAGTGGTGCG
Suggested primer 2:ACTGCGTGTGTCATCCATGT