Insertion junction: CLIP2.036171_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.036171
Chromosome:chromosome 11
Location:485963
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467592 Probable amino acid/metabolite permease; (1 of 1) PTHR11785//PTHR11785:SF228 - AMINO ACID TRANSPORTER // GABA-SPECIFIC PERMEASE CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCATCACCTTTTCGACCGTAGGCGTGCTGTGGGTCTTCACGCGAGGT
Internal bar code:TGGGGGTTATCGCCAATCGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:261
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:TTGCTCTACGTGGGTTGCAT